PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0138.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ERF

Protein Properties

Length: 617aa MW: 69158.9 Da PI: 10.8492

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0138.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.2e-15	30	79	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++++G+r ++ +gr++AeIrd ++ ++r++lg+f++ e A +a++ a+++l+ Kaladp0055s0138.1.p 30 PKFRGIRERP-WGRFAAEIRDpWK----KTRVWLGTFDSVEAATRAYDTAARSLR 79 79***888.******883....5********************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MGKVRGGATA AASLGNQVKD APLEIGSAEP KFRGIRERPW GRFAAEIRDP WKKTRVWLGT 60 FDSVEAATRA YDTAARSLRC PKARTNFPTP PSSSIVFIFH RVAFEPSSSI VFMFGVVFES 120 SSSSSELSSN ISKFNSSSSS YLRRLSSPKS VSPPSSIRLC TFRRPFELVS LRRKGIPRTS 180 SEKGTTGHKD LTLKDSEKEN SGSNSGPKDL TPEGFGKGKT GIRRSSRAGR YTFKNISKNP 240 TETIILDADD SEKGKVIAES SKAVHKRKGP IKKGVVIAES INAMHNQDSD SDFETLTLIN 300 LVPKQKKRKV STTGASTFSQ TLDKSKLGDD VDRKRKGKKR VDEDDSCKID LSHITPYQYP 360 CRFKTRCTPQ RLHQILGNLT EQHRRGIKEL GFGSILDFRF WELHSRFGRW LVESFDATRC 420 TLDMKIGRLH ITIDDIERIL GLPKAGQLFK RVGDRGGAGA DLALEDRIIG PLPTVEADRS 480 VVLGEKPNLL FTSTIVEGMK NGFTNQKILN VINDPNEAKK MNWCQYVLDS LQDGKVKWTE 540 NSKKSSFLLY VQLVRPPAHM NSLSQMKTAY HRWRGPTQAH RSRTRGRRFP ERTTAFHVEG 600 NSFALKRERH RLVKQR*

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MGKVRGGATA AASLGNQVKD APLEIGSAEP KFRGIRERPW GRFAAEIRDP WKKTRVWLGT  60
FDSVEAATRA YDTAARSLRC PKARTNFPTP PSSSIVFIFH RVAFEPSSSI VFMFGVVFES  120
SSSSSELSSN ISKFNSSSSS YLRRLSSPKS VSPPSSIRLC TFRRPFELVS LRRKGIPRTS  180
SEKGTTGHKD LTLKDSEKEN SGSNSGPKDL TPEGFGKGKT GIRRSSRAGR YTFKNISKNP  240
TETIILDADD SEKGKVIAES SKAVHKRKGP IKKGVVIAES INAMHNQDSD SDFETLTLIN  300
LVPKQKKRKV STTGASTFSQ TLDKSKLGDD VDRKRKGKKR VDEDDSCKID LSHITPYQYP  360
CRFKTRCTPQ RLHQILGNLT EQHRRGIKEL GFGSILDFRF WELHSRFGRW LVESFDATRC  420
TLDMKIGRLH ITIDDIERIL GLPKAGQLFK RVGDRGGAGA DLALEDRIIG PLPTVEADRS  480
VVLGEKPNLL FTSTIVEGMK NGFTNQKILN VINDPNEAKK MNWCQYVLDS LQDGKVKWTE  540
NSKKSSFLLY VQLVRPPAHM NSLSQMKTAY HRWRGPTQAH RSRTRGRRFP ERTTAFHVEG  600
NSFALKRERH RLVKQR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	336	KKRKVSTTGASTFSQTLDKSKLGDDVDRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50640.1	2e-28	ERF family protein