PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0053s0637.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 480aa MW: 51964.6 Da PI: 6.1444 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 49.9 | 5.9e-16 | 287 | 333 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L A+eY+ksLq Kaladp0053s0637.4.p 287 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDDAIEYLKSLQ 333 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence |
MANHCVPNFD MDDEYPIPSS SAPFRPSRKS SMQEDEVMEL LWQNGQIVMQ RAGSKPQQPR 60 PTFPVASGEA RDPPAPPPLF IHEDEMASWL HYPLDDPSFD RDFCNDLLYP SASCADTAVT 120 DPIPETRPPP PPLPPPPRPP IPPARTQGFG HFSRLRPRHE AGPSKAGDGS VSVTVVESNV 180 TPAAAPPESR ESQAAGDVGG GGRGLVAGSS SVGGGLETTS LDFTVASSSG ASGAEPDFKP 240 SATEDKKRKG READDTECHS QEDVPKAADA KKQVRGSTAK RTRAAEVHNL SERRRRDRIN 300 EKMKALQELI PRCNKSDKAS MLDDAIEYLK SLQLQVQMMS MGCGMVPMMF PGMQQYMQPM 360 GMGLGVDPNR PVMPFPMATP THLAPRFPVP SYNHLPLPPF VANAASRIQV NNPASMLNPV 420 GTQNANLVQV HPMAAQYQPY LGYQTMPMQP SQIEVMATQN ARKPNHSTGP ETTEEPQPG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 292 | 297 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 3e-60 | bHLH family protein |