PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0637.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 511aa MW: 55244.2 Da PI: 6.5118

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0637.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.4e-16	287	333	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L A+eY+ksLq Kaladp0053s0637.1.p 287 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDDAIEYLKSLQ 333 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MANHCVPNFD MDDEYPIPSS SAPFRPSRKS SMQEDEVMEL LWQNGQIVMQ RAGSKPQQPR 60 PTFPVASGEA RDPPAPPPLF IHEDEMASWL HYPLDDPSFD RDFCNDLLYP SASCADTAVT 120 DPIPETRPPP PPLPPPPRPP IPPARTQGFG HFSRLRPRHE AGPSKAGDGS VSVTVVESNV 180 TPAAAPPESR ESQAAGDVGG GGRGLVAGSS SVGGGLETTS LDFTVASSSG ASGAEPDFKP 240 SATEDKKRKG READDTECHS QEDVPKAADA KKQVRGSTAK RTRAAEVHNL SERRRRDRIN 300 EKMKALQELI PRCNKSDKAS MLDDAIEYLK SLQLQVQMMS MGCGMVPMMF PGMQQYMQPM 360 GMGLGVDPNR PVMPFPMATP THLAPRFPVP SYNHLPLPPF VANAASRIQV NNPASMLNPV 420 GTQNANLVQV HPMAAQYQPY LGYQTMPMQP SQIEVMATQN ARKPNHSTGP ETTEEPQPDD 480 HGRVGSGLRV DKPAGRQLPH TASHSSVLTC *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MANHCVPNFD MDDEYPIPSS SAPFRPSRKS SMQEDEVMEL LWQNGQIVMQ RAGSKPQQPR  60
PTFPVASGEA RDPPAPPPLF IHEDEMASWL HYPLDDPSFD RDFCNDLLYP SASCADTAVT  120
DPIPETRPPP PPLPPPPRPP IPPARTQGFG HFSRLRPRHE AGPSKAGDGS VSVTVVESNV  180
TPAAAPPESR ESQAAGDVGG GGRGLVAGSS SVGGGLETTS LDFTVASSSG ASGAEPDFKP  240
SATEDKKRKG READDTECHS QEDVPKAADA KKQVRGSTAK RTRAAEVHNL SERRRRDRIN  300
EKMKALQELI PRCNKSDKAS MLDDAIEYLK SLQLQVQMMS MGCGMVPMMF PGMQQYMQPM  360
GMGLGVDPNR PVMPFPMATP THLAPRFPVP SYNHLPLPPF VANAASRIQV NNPASMLNPV  420
GTQNANLVQV HPMAAQYQPY LGYQTMPMQP SQIEVMATQN ARKPNHSTGP ETTEEPQPDD  480
HGRVGSGLRV DKPAGRQLPH TASHSSVLTC *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	297	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	5e-60	bHLH family protein