PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0053s0294.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 27877.5 Da PI: 9.8014 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44 | 3.9e-14 | 61 | 113 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+r+hn+ Er+RR++iN+ ++ Lr+llP + ++s+++s +++ + ++I +Lq Kaladp0053s0294.1.p 61 RKRNHNASERQRRKKINDLYSSLRSLLPAS--EQSGRMSIPTTVARILKFIPELQ 113 7999*************************5..5*****************99998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MLSVTSSSST SLFGWPSDEA VYGHRINQGF YDLEELAAAA HADHLGTPGG DQGGGEYGDL 60 RKRNHNASER QRRKKINDLY SSLRSLLPAS EQSGRMSIPT TVARILKFIP ELQGEVERLE 120 KKKQAMSKKI NKVRESVFSS SSSKLAGADQ KVRGTDEAKA SITRDKSNRS SVLTSKVGDR 180 EFVIQISTLQ VSVSEILLSL EEDGFQLINA SSSESFSGRV FLNLHLQKVG VIRKMECEGL 240 DEKLLSMLEK RR* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 61 | 75 | RKRNHNASERQRRKK |
2 | 62 | 73 | KRNHNASERQRR |
3 | 63 | 73 | RNHNASERQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-39 | bHLH family protein |