PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0209.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 226aa MW: 26200.3 Da PI: 8.1436

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0209.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7e-18	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ a+ g++Rt+k+c++rw++yl Kaladp0053s0209.1.p 22 KGPWTMEEDLILINYIANHGEGIWNSLAKSAGLKRTGKSCRLRWLNYL 69 79********************************************97 PP
2	Myb_DNA-binding	54.1	3.6e-17	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l++++++++G++ W++Ia++++ gRt++++k++w++ Kaladp0053s0209.1.p 75 RGNITPEEQMLILQLHAKWGNR-WSKIAKHLP-GRTDNEIKNFWRT 118 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MDGKRPYFLT SCSHSVDPEV RKGPWTMEED LILINYIANH GEGIWNSLAK SAGLKRTGKS 60 CRLRWLNYLR PDVRRGNITP EEQMLILQLH AKWGNRWSKI AKHLPGRTDN EIKNFWRTRI 120 QKYINKQDEN HHHQQQDDTQ LMTTCKQVSQ ASSSQMSTTT TAASSYLNAF DNHHHHHQAN 180 SPQQLFPYPL EPYPNGGIIM PDDLNDSMWN NMEEFWSINA VSTHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	2e-74	MYB family protein