PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0086.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 264aa    MW: 29684.1 Da    PI: 10.0743
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0086.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.46.1e-313282151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien++nrqvtf+kRrng+lKKA+ELSvLC+aeva+i+fss+g+lyeys+
  Kaladp0053s0086.1.p 32 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCEAEVALIVFSSRGRLYEYSN 82
                         79***********************************************95 PP
2K-box105.47e-351021975100
                K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                          ++ s++e++ + +qqe++kL+++i+++q+ +R++lGe+L++L+ k+L++Le++Leks++++R+kKnell+++ie +qkke  l+++n++L
  Kaladp0053s0086.1.p 102 NTASVAETNIQMYQQESRKLRQQINTIQKANRNILGESLGNLNPKDLKNLEKKLEKSISNVRAKKNELLYSEIEFMQKKEAYLHNNNQYL 191
                          445599************************************************************************************ PP

                K-box  95 rkklee 100
                          r+k+ e
  Kaladp0053s0086.1.p 192 RAKISE 197
                          ***976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MSFQNQQSSR EDADDSVSPT QPRLGRGKIE IKRIENTTNR QVTFCKRRNG LLKKAYELSV  60
LCEAEVALIV FSSRGRLYEY SNNNSVKSTI ERYKKAHSDS PNTASVAETN IQMYQQESRK  120
LRQQINTIQK ANRNILGESL GNLNPKDLKN LEKKLEKSIS NVRAKKNELL YSEIEFMQKK  180
EAYLHNNNQY LRAKISENAR AQQQMNSISG TGGGGGGSGY DHQVIPSGGG QQFDSRNFFE  240
VNNALQSSTS YSSRPDHIPL QLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.12e-88MIKC_MADS family protein