PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0304.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 224aa MW: 24223.5 Da PI: 9.3772 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 94.7 | 1e-29 | 4 | 105 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85 +C++C+vlr++C++dC l+p + p++q +++ +++k++G++ ++++l+a+++++r ++++sl+yeA+ r+ dPvyGavg++++ ++ Kaladp0050s0304.1.p 4 SCNGCRVLRKGCPDDCSLRPGLswittPEAQGNATVFLAKFYGRAGLMNFLNATSDHHRAEIFKSLLYEACGRIVDPVYGAVGLLWSNNW 93 6***************************************************************************************** PP DUF260 86 qleqlkaelall 97 +++++e++l Kaladp0050s0304.1.p 94 SHCEAAVEAVLS 105 ******998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MKTSCNGCRV LRKGCPDDCS LRPGLSWITT PEAQGNATVF LAKFYGRAGL MNFLNATSDH 60 HRAEIFKSLL YEACGRIVDP VYGAVGLLWS NNWSHCEAAV EAVLSGGRIL PIQNPRDHAG 120 HPIAALNSFD IRHVARPAPH EPDVAPRFTI RTKRRSPRFP KKVVRANWTE LGGPSDGSGF 180 SVETVEGSVA NRVRPNQQQG SDDKSETGLE LSLNLGPGKL KAA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68510.1 | 2e-58 | LBD family protein |