PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0280.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 303aa    MW: 33789 Da    PI: 6.5052
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0280.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.7e-13112158354
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          r+h+e+Er+RR+riNs + +Lr+llP+      +K +Ka+ L +++++ k+L
  Kaladp0050s0280.1.p 112 RNHSEAERKRRERINSHLTKLRSLLPNT-----TKTDKASLLAEVIQCAKHL 158
                          78*************************9.....8************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MMEDNDVYGS QTFHHNHLLF HQHQQQDITI MQPPFSSSSS FDPAYNPFLI PPPPSFSHSC  60
TYTPDHYMSS NLSTNDHGAL GSSSLLGSML SQEFEKMRSM DMMEAKALAA SRNHSEAERK  120
RRERINSHLT KLRSLLPNTT KTDKASLLAE VIQCAKHLKQ QTSALSELHT VPTEADDLTF  180
ETCATRDGQL LIKASLCCED RSDVLQDLIS TFQALNLKIV KADMTTFGGR MKYVVFIVGD  240
SDQTCGQIED AADQPFVVTI QEAFRDVMGR SLGKLDNKGP SSDYGFKRRR VKGECQRSLD  300
AN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118123ERKRRE
2287291KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-54bHLH family protein