PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0212.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GRF | ||||||||
Protein Properties | Length: 213aa MW: 23914.4 Da PI: 9.4325 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.8 | 1.1e-24 | 133 | 177 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrC+RtDGKkWRC +++++ +k+CE+Hlhrgr+rsrk +++ Kaladp0050s0212.1.p 133 DPEPGRCKRTDGKKWRCAKEAMPEYKYCEKHLHRGRHRSRKLVDP 177 79***************************************9987 PP | |||||||
2 | QLQ | 37.1 | 9.6e-14 | 67 | 101 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q q+L++Q+ +++y+ a+++vP Ll +i+k Kaladp0050s0212.1.p 67 FTFMQRQELEQQACIFRYIEAGAQVPYPLLYPIWK 101 9********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVDSATQVSR LPDGAETGID LGLELGLGSN FEAEMRKYKE RVVVVLDDEE DDDDRRRKKR 60 VRVPMGFTFM QRQELEQQAC IFRYIEAGAQ VPYPLLYPIW KSVAGSADRC RLPFIPNLFA 120 GPVGLSWKQG RSDPEPGRCK RTDGKKWRCA KEAMPEYKYC EKHLHRGRHR SRKLVDPSSA 180 TGLPPPPPSQ TKAPHFPAPE RIGLSIALPS GQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 60 | RRRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 3e-30 | GRF family protein |