PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0204.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25374.9 Da PI: 9.4792 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.8 | 7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gkl+e+s+ Kaladp0050s0204.2.p 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSTRGKLFEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 71.9 | 1.9e-24 | 92 | 175 | 14 | 97 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + + e++ ++++ie++ ++qR+l+Ged+esLs++eL + e+qLe+sl++iR+kKnell++qi++l++ eke+ een +Lrk+ Kaladp0050s0204.2.p 92 NMDIRDEISDMERQIEKISSSQRKLKGEDVESLSINELIETEEQLEQSLSRIRAKKNELLRDQIQKLKQEEKEMLEENVRLRKE 175 556789****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFST RGKLFEFSNS 60 TSGMRKTIDR YEKKTKGNDT KGEGADKHAD PNMDIRDEIS DMERQIEKIS SSQRKLKGED 120 VESLSINELI ETEEQLEQSL SRIRAKKNEL LRDQIQKLKQ EEKEMLEENV RLRKEARIGS 180 GKPWQQKLLE QLPSPEKSDD CGVETELFIG LPEMRRSRR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 4e-59 | MIKC_MADS family protein |