PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0049s0074.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 311aa    MW: 33494.6 Da    PI: 6.5592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0049s0074.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.2e-10158202554
                          HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Kaladp0049s0074.1.p 158 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 202
                          99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MANNHHHQHH QHQHQHHHSE APADDFLEHL LGIPSYATSS DAGLGVNDVS LTGGPQSHMM  60
LQLSSGADGS GHVGQGFNGS VFPLGLSLDQ GKPGGFLKLD EASGSVKQFM EDGGDGRAPA  120
VKNTFHAQPM QNNMPAAPHP PAMRPRVRAR RGQATDPHSI AERLRRERIA ERIRALQELV  180
PSVNKTDRAA MLDEIVDYVK FLRLQVKVLS MSRLGGAGAV APLVTDIPLS SVEEESGEDG  240
RNQPAWEKWS NDGTEQQVAK LMEENVGAAM QFLQSKALCI MPISLASVIY HTPQPDSSTL  300
VKPEGNPPPS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-101bHLH family protein