PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0903.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25210.6 Da PI: 8.919 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.3 | 1.6e-09 | 158 | 205 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Kaladp0048s0903.1.p 158 SHSLAERARREKISKRMKILQDLVPGC----NKLIGKALVLDEIINYVQSLQ 205 8*************************9....666*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MELPLVNESS FTPANPASYS LEDFWPLGAG IGDHTRVLGL RLANSERRIG LGNRDGSAEE 60 STVTDQLISR NGGGGRKRRL ADESSKVADA SGAEQLKTSS TKRVKILEPK EEKRSMKDEV 120 DGASVTGAKH AEQNTNVSEP PKQDYIHVRA RRGQATDSHS LAERARREKI SKRMKILQDL 180 VPGCNKLIGK ALVLDEIINY VQSLQHQVEV TTVGLCVRVF YCLICLFLV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 7e-58 | bHLH family protein |