PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0702.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 378aa MW: 42416.8 Da PI: 5.0999

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0702.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	135	178	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 e+ErrRR+++N+++ +Lr+l+P + Kl+Ka+iL A+ Y+k+L Kaladp0048s0702.3.p 135 LEAERRRRKKLNERLYNLRSLVPIiS------KLDKASILVDAITYVKDL 178 589*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MQEIHATRVL IPVPGALVEL FAAKQVFEDQ QVVDFVMSHC SNQLELQAFF NSGLPSSTHG 60 AHDNGYGMEA MMTHDGSDLP REPSGGHSKD LNEKDSVKPE MGRSDSISDC SDQIDDEDDA 120 GCRKRNGKRP QAKNLEAERR RRKKLNERLY NLRSLVPIIS KLDKASILVD AITYVKDLKK 180 QEKELQDELE ELSNDEDVRN NGTANIEAPT DFMSYPDNLN APNNLLFGAI DSMQPCTLIT 240 RTHEAATEDD KVQQMEPQVE VTLINANKFF IKVFCEHKPG RLVRLLEFLN SLGLEVTNVN 300 VTSCKKLVSN LFEVELKRDS EVVADDLKNS LLELTRIPLS SGWMHDQIPS KPGNGVDIYQ 360 CHHGMMNHHG IPYHLQN*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MQEIHATRVL IPVPGALVEL FAAKQVFEDQ QVVDFVMSHC SNQLELQAFF NSGLPSSTHG  60
AHDNGYGMEA MMTHDGSDLP REPSGGHSKD LNEKDSVKPE MGRSDSISDC SDQIDDEDDA  120
GCRKRNGKRP QAKNLEAERR RRKKLNERLY NLRSLVPIIS KLDKASILVD AITYVKDLKK  180
QEKELQDELE ELSNDEDVRN NGTANIEAPT DFMSYPDNLN APNNLLFGAI DSMQPCTLIT  240
RTHEAATEDD KVQQMEPQVE VTLINANKFF IKVFCEHKPG RLVRLLEFLN SLGLEVTNVN  300
VTSCKKLVSN LFEVELKRDS EVVADDLKNS LLELTRIPLS SGWMHDQIPS KPGNGVDIYQ  360
CHHGMMNHHG IPYHLQN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	144	RKRNGKRPQAKNLEAERRRRKK
2	138	145	ERRRRKKL
3	139	183	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
4	140	184	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
5	141	185	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	8e-32	bHLH family protein