PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0702.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 474aa MW: 53294 Da PI: 4.7838

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0702.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.3e-12	231	274	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 e+ErrRR+++N+++ +Lr+l+P + Kl+Ka+iL A+ Y+k+L Kaladp0048s0702.2.p 231 LEAERRRRKKLNERLYNLRSLVPIiS------KLDKASILVDAITYVKDL 274 589*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MGCFGWLCRV IEWLDCCCAS AAVNSLDKQD ELMFPVSSVF CCRDAVFQHQ RTQCCDFLSQ 60 LPSSVSLDDS GIYAQVLFSN QPRWLNFFNN PDQENPSEEI HATRVLIPVP GALVELFAAK 120 QVFEDQQVVD FVMSHCSNQL ELQAFFNSGL PSSTHGAHDN GYGMEAMMTH DGSDLPREPS 180 GGHSKDLNEK DSVKPEMGRS DSISDCSDQI DDEDDAGCRK RNGKRPQAKN LEAERRRRKK 240 LNERLYNLRS LVPIISKLDK ASILVDAITY VKDLKKQEKE LQDELEELSN DEDVRNNGTA 300 NIEAPTDFMS YPDNLNAPNN LLFGAIDSMQ PCTLITRTHE AATEDDKVQQ MEPQVEVTLI 360 NANKFFIKVF CEHKPGRLVR LLEFLNSLGL EVTNVNVTSC KKLVSNLFEV ELKRDSEVVA 420 DDLKNSLLEL TRIPLSSGWM HDQIPSKPGN GVDIYQCHHG MMNHHGIPYH LQN*

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MGCFGWLCRV IEWLDCCCAS AAVNSLDKQD ELMFPVSSVF CCRDAVFQHQ RTQCCDFLSQ  60
LPSSVSLDDS GIYAQVLFSN QPRWLNFFNN PDQENPSEEI HATRVLIPVP GALVELFAAK  120
QVFEDQQVVD FVMSHCSNQL ELQAFFNSGL PSSTHGAHDN GYGMEAMMTH DGSDLPREPS  180
GGHSKDLNEK DSVKPEMGRS DSISDCSDQI DDEDDAGCRK RNGKRPQAKN LEAERRRRKK  240
LNERLYNLRS LVPIISKLDK ASILVDAITY VKDLKKQEKE LQDELEELSN DEDVRNNGTA  300
NIEAPTDFMS YPDNLNAPNN LLFGAIDSMQ PCTLITRTHE AATEDDKVQQ MEPQVEVTLI  360
NANKFFIKVF CEHKPGRLVR LLEFLNSLGL EVTNVNVTSC KKLVSNLFEV ELKRDSEVVA  420
DDLKNSLLEL TRIPLSSGWM HDQIPSKPGN GVDIYQCHHG MMNHHGIPYH LQN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	240	RKRNGKRPQAKNLEAERRRRKK
2	234	241	ERRRRKKL
3	235	279	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
4	236	280	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
5	237	281	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-31	bHLH family protein