PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0702.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 495aa MW: 55980.9 Da PI: 4.77

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0702.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.5e-12	252	295	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 e+ErrRR+++N+++ +Lr+l+P + Kl+Ka+iL A+ Y+k+L Kaladp0048s0702.1.p 252 LEAERRRRKKLNERLYNLRSLVPIiS------KLDKASILVDAITYVKDL 295 589*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MRSFMERLRD LVGNNGWDYC VVWRLNEDQR VIEWLDCCCA SAAVNSLDKQ DELMFPVSSV 60 FCCRDAVFQH QRTQCCDFLS QLPSSVSLDD SGIYAQVLFS NQPRWLNFFN NPDQENPSEE 120 IHATRVLIPV PGALVELFAA KQVFEDQQVV DFVMSHCSNQ LELQAFFNSG LPSSTHGAHD 180 NGYGMEAMMT HDGSDLPREP SGGHSKDLNE KDSVKPEMGR SDSISDCSDQ IDDEDDAGCR 240 KRNGKRPQAK NLEAERRRRK KLNERLYNLR SLVPIISKLD KASILVDAIT YVKDLKKQEK 300 ELQDELEELS NDEDVRNNGT ANIEAPTDFM SYPDNLNAPN NLLFGAIDSM QPCTLITRTH 360 EAATEDDKVQ QMEPQVEVTL INANKFFIKV FCEHKPGRLV RLLEFLNSLG LEVTNVNVTS 420 CKKLVSNLFE VELKRDSEVV ADDLKNSLLE LTRIPLSSGW MHDQIPSKPG NGVDIYQCHH 480 GMMNHHGIPY HLQN*

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MRSFMERLRD LVGNNGWDYC VVWRLNEDQR VIEWLDCCCA SAAVNSLDKQ DELMFPVSSV  60
FCCRDAVFQH QRTQCCDFLS QLPSSVSLDD SGIYAQVLFS NQPRWLNFFN NPDQENPSEE  120
IHATRVLIPV PGALVELFAA KQVFEDQQVV DFVMSHCSNQ LELQAFFNSG LPSSTHGAHD  180
NGYGMEAMMT HDGSDLPREP SGGHSKDLNE KDSVKPEMGR SDSISDCSDQ IDDEDDAGCR  240
KRNGKRPQAK NLEAERRRRK KLNERLYNLR SLVPIISKLD KASILVDAIT YVKDLKKQEK  300
ELQDELEELS NDEDVRNNGT ANIEAPTDFM SYPDNLNAPN NLLFGAIDSM QPCTLITRTH  360
EAATEDDKVQ QMEPQVEVTL INANKFFIKV FCEHKPGRLV RLLEFLNSLG LEVTNVNVTS  420
CKKLVSNLFE VELKRDSEVV ADDLKNSLLE LTRIPLSSGW MHDQIPSKPG NGVDIYQCHH  480
GMMNHHGIPY HLQN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	261	RKRNGKRPQAKNLEAERRRRKK
2	255	262	ERRRRKKL
3	256	300	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
4	257	301	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK
5	258	302	RRRRKKLNERLYNLRSLVPIISKLDKASILVDAITYVKDLKKQEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	5e-40	bHLH family protein