PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0335.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 458aa MW: 50290.8 Da PI: 7.1944

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0335.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.5e-05	348	386	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq Kaladp0048s0335.1.p 348 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 386 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MESANIPHHL DLHQEQQQQL LGPASSSSSS HEASYVHGSW YGASSNSSNH FAWSAKSPHM 60 NVDNKIYQSN NTQLYKQYTG EKDENDEIQI PWSNNNSHNN TCTSIKNDGQ HQTLILTHEQ 120 PSNSSKLDLF NSLLFPKFTD MLSSTQSSIE DLQHLSPTCY VKNDHFQDLN QHDTKSVTKP 180 ALLMSPSGLI QPQFQVGQFL ANTQNCSGYG GSPLMPSRGT FSQIFPSVNI SNMSSNQSCS 240 TISGSLDMNL QALDLLTSAR FGGAVNNDNQ SQPHHLGLAN ESHAFGQQHM QQFGHRPTAS 300 TPNKLPSPFL GGSITEAKRS QPAESKSSQA SSKKSRSETR ACPPLKVRKE KLGDRIAALQ 360 QLVAPFGKTD TASVLMEAIG YIKFLQNQIE TLSVPYMKSS RSRPMKQAHL MVDHDDSVES 420 KRDLRSRGLC LVPLSCMSYV TNEDGSGWPS TEYLGGT*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MESANIPHHL DLHQEQQQQL LGPASSSSSS HEASYVHGSW YGASSNSSNH FAWSAKSPHM  60
NVDNKIYQSN NTQLYKQYTG EKDENDEIQI PWSNNNSHNN TCTSIKNDGQ HQTLILTHEQ  120
PSNSSKLDLF NSLLFPKFTD MLSSTQSSIE DLQHLSPTCY VKNDHFQDLN QHDTKSVTKP  180
ALLMSPSGLI QPQFQVGQFL ANTQNCSGYG GSPLMPSRGT FSQIFPSVNI SNMSSNQSCS  240
TISGSLDMNL QALDLLTSAR FGGAVNNDNQ SQPHHLGLAN ESHAFGQQHM QQFGHRPTAS  300
TPNKLPSPFL GGSITEAKRS QPAESKSSQA SSKKSRSETR ACPPLKVRKE KLGDRIAALQ  360
QLVAPFGKTD TASVLMEAIG YIKFLQNQIE TLSVPYMKSS RSRPMKQAHL MVDHDDSVES  420
KRDLRSRGLC LVPLSCMSYV TNEDGSGWPS TEYLGGT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	4e-52	bHLH family protein