PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0102.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 275aa    MW: 29948.6 Da    PI: 7.7563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0102.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.3e-09157204455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR +i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Kaladp0048s0102.2.p 157 SHSLAERARRVKISERMKILQDLVPGC----SKVIGKALVLDEIINYVQSLQ 204
                          8*************************9....566*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MELPLVNESS FTPASLASYS LEDFWPLGAG IGDHARVLGL RTANSERAGL GNRDGSAEES  60
TVTDQSFSRN GGGGRKRRLA DESSKVGEAS GGAGQLTSST KRVNILELKE EQKSMKDEVD  120
GTYVTGAKHA EQSTKVSEPS KLDYIHVRAR RGQATDSHSL AERARRVKIS ERMKILQDLV  180
PGCSKVIGKA LVLDEIINYV QSLQYQVEFL SMKLEAVNSS IVPKDKMLPA KDLEVSGFDF  240
AGMTFGTQPN SKYAQGPQSE WLHMHLGRNF ERAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.13e-63bHLH family protein