PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0102.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 276aa MW: 30076.8 Da PI: 8.43 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.4e-09 | 158 | 205 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +i +++ L++l+P + sk Ka +L + ++Y++sLq Kaladp0048s0102.1.p 158 SHSLAERARRVKISERMKILQDLVPGC----SKVIGKALVLDEIINYVQSLQ 205 8*************************9....566*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MELPLVNESS FTPASLASYS LEDFWPLGAG IGDHARVLGL RTANSERAGL GNRDGSAEES 60 TVTDQSFSRN GGGGRKRRLA DESSKVGEAS GGAGQLKTSS TKRVNILELK EEQKSMKDEV 120 DGTYVTGAKH AEQSTKVSEP SKLDYIHVRA RRGQATDSHS LAERARRVKI SERMKILQDL 180 VPGCSKVIGK ALVLDEIINY VQSLQYQVEF LSMKLEAVNS SIVPKDKMLP AKDLEVSGFD 240 FAGMTFGTQP NSKYAQGPQS EWLHMHLGRN FERAT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 5e-65 | bHLH family protein |