PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0087.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 334aa    MW: 36953.3 Da    PI: 7.9889
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0087.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.2e-182269148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd  lv +v+q+G  +W++++++ g+ R+ k+c++rw +yl
  Kaladp0048s0087.1.p 22 KGPWTPEEDIALVSYVQQHGASNWRAVPAKAGLLRCSKSCRLRWTNYL 69
                         79******************************99************97 PP
2Myb_DNA-binding48.42.1e-1575120148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T++E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0048s0087.1.p  75 RGNFTEQEQKMIIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 120
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MARSPCCEDH SKSGGGLAGL KKGPWTPEED IALVSYVQQH GASNWRAVPA KAGLLRCSKS  60
CRLRWTNYLR PGIKRGNFTE QEQKMIIHLQ ALLGNRWAAI ASYLPERTDN DIKNYWNTHL  120
KKRVIKHDQQ RLRLGGRDDG GFSLLSDSGA MAKGQWERRL QTDINLAKQA LSQALAVEKT  180
EHDPASDHTR DQLARSSNTS LTYSITPSPS PSHSPTTTTY ASSTANISKL LDGWMTVKKN  240
EPAVPGSAES SYTNQFDSNL NINYQFGNVM GASSSSEDYD QFSNYMETKP YMESQVTLLE  300
KWLLVDDGSN SVNVAGGATG MMFDQKDIDS LFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.12e-80MYB family protein