PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0048s0068.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 27888.8 Da PI: 8.1226 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.1 | 8.3e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifss+gklye++s Kaladp0048s0068.1.p 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 92.3 | 8.4e-31 | 89 | 173 | 16 | 100 |
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +qe+ kLk ++e Lq+ qR+llGedL +L+ keL+qLe+qLe slk+iRs+K++++l q+ +lq ke++l e+nkaL++klee Kaladp0048s0068.1.p 89 NNYQEYLKLKGRVEALQKIQRNLLGEDLAPLNTKELEQLEHQLEISLKQIRSTKTQFMLHQLADLQLKEQNLLETNKALKQKLEE 173 679*******************************************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 246 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFCSS 60 PSMIKTLERY QQCSFSALDA CRPPCDSPNN YQEYLKLKGR VEALQKIQRN LLGEDLAPLN 120 TKELEQLEHQ LEISLKQIRS TKTQFMLHQL ADLQLKEQNL LETNKALKQK LEEGQERIPF 180 AQPWDDGSGH TIPYIHLATH SEASFYQPTG ITNNPTVQLG YSHAGGGDEG SQPQSMNCFM 240 PGWFL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-97 | MIKC_MADS family protein |