PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27190.1 Da    PI: 8.9206
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.96.2e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr g+lKKA E+SvLCda+va+i+fs++gkl ey++
  Kaladp0048s0067.1.p  9 KRIENKINRQVTFSKRRSGLLKKACEISVLCDADVALIVFSTKGKLSEYAT 59
                         79***********************************************86 PP
2K-box94.91.3e-318617412100
                K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                            + s++ e+akL+ +ie Lqr+qR+l+GedL++Lsl+eLq++e+qLe++lk+iR kKn+l+  +i e+ kk k +qeen+ L kk++e
  Kaladp0048s0067.1.p  86 ISTGSWSLEHAKLRHRIEHLQRNQRNLVGEDLDPLSLRELQSVEHQLENALKHIRLKKNQLMNLSIAEMHKKDKIMQEENNFLGKKIKE 174
                          45789*********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KACEISVLCD ADVALIVFST KGKLSEYATD  60
ASMERILERY ESYSSSDKQI VSTDLISTGS WSLEHAKLRH RIEHLQRNQR NLVGEDLDPL  120
SLRELQSVEH QLENALKHIR LKKNQLMNLS IAEMHKKDKI MQEENNFLGK KIKESEKALA  180
ELGQLDCQSQ DASQPPIIMS EPTTQHVDIN REISSGEGST NQNQPCTALL PWMLRGPSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-86MIKC_MADS family protein