PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0057.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 352aa MW: 38929.8 Da PI: 8.9846

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0057.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.8	6.2e-16	170	216	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ +L++++P+a K +Ka++L ++++Y+k+Lq Kaladp0048s0057.1.p 170 VHNQSERKRRDRINQKMKTLQKMVPNA-----SKTDKASMLDEVIKYLKQLQ 216 5***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MEPFYRLNDY DQVAELTWEN GQLGFQGLAP PAAHHSKSTW SAANETLESI VQQGSTVCHH 60 HHHPQQHSKL NRALNPAANI NSACSSFAAS SSNNHPVPWL ELDQCNARAE SLEPSACANN 120 LRQSNTVMTT TSTEEDFVYQ YGSDNKNEGH ESKGGTGRSS STRRSRTAAV HNQSERKRRD 180 RINQKMKTLQ KMVPNASKTD KASMLDEVIK YLKQLQSQIQ MMNSIRNMPQ MMVPLGIQQQ 240 QQQLQNQVSL FARTGMNMNM GLMGMGGALN MMHIPRSMSL QPAPQQLHPS ATTSTNTTFP 300 PSFLMVPPMI PTPEISQSMN MDLFTKMAAF CSHQATSNGT ATQEKNGPVS R*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MEPFYRLNDY DQVAELTWEN GQLGFQGLAP PAAHHSKSTW SAANETLESI VQQGSTVCHH  60
HHHPQQHSKL NRALNPAANI NSACSSFAAS SSNNHPVPWL ELDQCNARAE SLEPSACANN  120
LRQSNTVMTT TSTEEDFVYQ YGSDNKNEGH ESKGGTGRSS STRRSRTAAV HNQSERKRRD  180
RINQKMKTLQ KMVPNASKTD KASMLDEVIK YLKQLQSQIQ MMNSIRNMPQ MMVPLGIQQQ  240
QQQLQNQVSL FARTGMNMNM GLMGMGGALN MMHIPRSMSL QPAPQQLHPS ATTSTNTTFP  300
PSFLMVPPMI PTPEISQSMN MDLFTKMAAF CSHQATSNGT ATQEKNGPVS R*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	180	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	3e-26	bHLH family protein