PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0046s0337.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27504.4 Da PI: 5.7457 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ ++rWv+e+r+p +k+ r++lg++ tae+Aa+a++ a+++++g Kaladp0046s0337.1.p 67 PVYRGVRRRN-SNRWVCEVREP---NKKNRIWLGTYPTAEMAARAHDVAALAFRG 117 68*****888.8******9998...3369**********************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDVFSQYSDP LPFSSLYSQS TDQRDNSSVS DSRIGRTRSY SDEDIMLASS HPKKRAGRKK 60 FRETRHPVYR GVRRRNSNRW VCEVREPNKK NRIWLGTYPT AEMAARAHDV AALAFRGLKS 120 CLNFADSAWR LPVPASTDAA DIQRAAAEAA EMFRTPEDTD NLNKGNIVCT MGEASSGNNK 180 NEPNRQTQQG TSYYVDEEAI FDMPGLLNNM AEGLLLPPPS FLDGEFTWDN AENDTDLTLW 240 NHSI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-65 | ERF family protein |