PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0381.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 564aa    MW: 62468.6 Da    PI: 7.0668
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0381.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.61.7e-14275334155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +++Aa+a++ a++k++g
  Kaladp0045s0381.1.p 275 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDNEDKAARAYDLAALKYWG 334
                          57*******************666664478446**********99*************98 PP

2AP249.79.2e-16377428155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  Kaladp0045s0381.1.p 377 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 428
                          57****************988532...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    
MAPVPDQSNW LTFSLYPNMN MMRSSDDPDH QTHRQPHHHQ QQNNHNNSNF ISYEAAASPN  60
ASSPQYFIDN FYANGYSYSK PQMDFQHHRA QQQVPDSLPW LSSSAAAPKL ENFLDSSSMV  120
RYAESQTDTQ DSGLTMYEHG SAAAAYYNQA AAAQLIQTNS GSEVDDSGSL SRAAAVAGAH  180
HHHQQQQNQH QLVEYESSAN GAQQHQQSLI AFSHQQQPVQ NGGLSLGVNI NNNLNTTQNL  240
NNNCGAQIVQ QEEKGTVAVV DTSKKISDTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR  300
EGQARKGRQV YLGGYDNEDK AARAYDLAAL KYWGPNATTN FPVANYAKEL EEMKPMTKQE  360
FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD  420
IAAIKFRGIN AVTNFEMNRY DVEAITNSTL PVGGAAKRLK STLESEQKAL VSIALNEAQP  480
RPPSHTSSSN ISFSLTQPMS AIPCGIPFDA MPSLYQQSLY HQLQNSHPAL AIPEPQTSAA  540
SSGPAITFLP TTGEYYVWPH QSY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.11e-130AP2 family protein