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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0381.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 564aa MW: 62468.6 Da PI: 7.0668 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.7e-14 | 275 | 334 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g Kaladp0045s0381.1.p 275 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDNEDKAARAYDLAALKYWG 334 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 49.7 | 9.2e-16 | 377 | 428 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Kaladp0045s0381.1.p 377 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 428 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 564 aa Download sequence |
MAPVPDQSNW LTFSLYPNMN MMRSSDDPDH QTHRQPHHHQ QQNNHNNSNF ISYEAAASPN 60 ASSPQYFIDN FYANGYSYSK PQMDFQHHRA QQQVPDSLPW LSSSAAAPKL ENFLDSSSMV 120 RYAESQTDTQ DSGLTMYEHG SAAAAYYNQA AAAQLIQTNS GSEVDDSGSL SRAAAVAGAH 180 HHHQQQQNQH QLVEYESSAN GAQQHQQSLI AFSHQQQPVQ NGGLSLGVNI NNNLNTTQNL 240 NNNCGAQIVQ QEEKGTVAVV DTSKKISDTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR 300 EGQARKGRQV YLGGYDNEDK AARAYDLAAL KYWGPNATTN FPVANYAKEL EEMKPMTKQE 360 FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD 420 IAAIKFRGIN AVTNFEMNRY DVEAITNSTL PVGGAAKRLK STLESEQKAL VSIALNEAQP 480 RPPSHTSSSN ISFSLTQPMS AIPCGIPFDA MPSLYQQSLY HQLQNSHPAL AIPEPQTSAA 540 SSGPAITFLP TTGEYYVWPH QSY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.1 | 1e-130 | AP2 family protein |