PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0344.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 743aa MW: 83642.7 Da PI: 6.3926

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0344.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.8	8.5e-23	44	145	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD v+F Kaladp0045s0344.2.p 44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIAKDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFI- 131 99***************************9777666.49********************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++++ +l+++++r+ Kaladp0045s0344.2.p 132 -WNERNQLLLGIRRA 145 .7888889**997 PP
2	Auxin_resp	116.4	2.4e-38	170	253	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPra++seFv++++k++ka+ ++vsvGmRf+m fete+ss rr++Gt+++++d+dp rWpnS+Wrs+k Kaladp0045s0344.2.p 170 AAHAAATNSCFTIFYNPRACPSEFVIPLSKYVKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITSINDIDPARWPNSHWRSVK 253 79******************************87599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MHADVETDEV YAQMTLQPLS LQEQEVTYLP MEFGIPSKQP TNYFCKTLTA SDTSTHGGFS 60 VPRRAAEKVF PPLDFSLQPP AQELIAKDLH DVEWKFRHIF RGQPKRHLLT TGWSVFVSAK 120 RLVAGDAVLF IWNERNQLLL GIRRATRPQT AMPSSVLSSD SMHIGLLAAA AHAAATNSCF 180 TIFYNPRACP SEFVIPLSKY VKAVFHTRVS VGMRFRMLFE TEESSVRRYM GTITSINDID 240 PARWPNSHWR SVKVGWDEST AGERQPRVSL WDIEPLTTFP MYPSLFPFRM KRPWYPGVSS 300 FQDHRDEAAG ASLYSDHGRQ ALNFQQVGMF PCMQSRIDPS LFGHNQDHYQ PIMASGLVNT 360 ENGGHLKQQF MHFNMPLQSH QVPDGSNAQL QQLNKIGQQA STQSVMHGQT ILTENLPTHF 420 LQQQHNNQLK EVQQPSKQMY QQETQNQIEQ FRQRHQLDMG SSSVPKQEFT NSRTNFERQE 480 NASSRHNVLD SPGDGSSLMY VDQLSQQFYR PKFLHSEGAS FAHSLSLSPY LEKDAASEPD 540 TRNPVNRSHS SYGVSIDSSG LIMPTNVPIF TGSPIDAKAS SVPPEDSSVF QGSMYGGRQD 600 SPNLYCVRQF GSPLTSQIFV KVYKSGSVGR SLDISRFSSY DELREELGQM FDIEGHLDDP 660 LRSGWQLVFV DRENDVLLLG DDPWEAFVNN VWYIKILSPE DLHKLGNEGV ELPNPTDANL 720 GGHNNDDHDA VSKLPPIGPL GY*

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MHADVETDEV YAQMTLQPLS LQEQEVTYLP MEFGIPSKQP TNYFCKTLTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFSLQPP AQELIAKDLH DVEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDAVLF IWNERNQLLL GIRRATRPQT AMPSSVLSSD SMHIGLLAAA AHAAATNSCF  180
TIFYNPRACP SEFVIPLSKY VKAVFHTRVS VGMRFRMLFE TEESSVRRYM GTITSINDID  240
PARWPNSHWR SVKVGWDEST AGERQPRVSL WDIEPLTTFP MYPSLFPFRM KRPWYPGVSS  300
FQDHRDEAAG ASLYSDHGRQ ALNFQQVGMF PCMQSRIDPS LFGHNQDHYQ PIMASGLVNT  360
ENGGHLKQQF MHFNMPLQSH QVPDGSNAQL QQLNKIGQQA STQSVMHGQT ILTENLPTHF  420
LQQQHNNQLK EVQQPSKQMY QQETQNQIEQ FRQRHQLDMG SSSVPKQEFT NSRTNFERQE  480
NASSRHNVLD SPGDGSSLMY VDQLSQQFYR PKFLHSEGAS FAHSLSLSPY LEKDAASEPD  540
TRNPVNRSHS SYGVSIDSSG LIMPTNVPIF TGSPIDAKAS SVPPEDSSVF QGSMYGGRQD  600
SPNLYCVRQF GSPLTSQIFV KVYKSGSVGR SLDISRFSSY DELREELGQM FDIEGHLDDP  660
LRSGWQLVFV DRENDVLLLG DDPWEAFVNN VWYIKILSPE DLHKLGNEGV ELPNPTDANL  720
GGHNNDDHDA VSKLPPIGPL GY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein