PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0344.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 824aa    MW: 92265.4 Da    PI: 6.4572
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0344.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.69.8e-23125226199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae+       +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD v+F  
  Kaladp0045s0344.1.p 125 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIAKDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFI- 212
                          99*****************************9777666.49************************************************. PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                           ++++ +l+++++r+
  Kaladp0045s0344.1.p 213 -WNERNQLLLGIRRA 226
                          .7888889****997 PP
2Auxin_resp116.22.8e-38251334183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          aahaa+t+s F+++YnPra++seFv++++k++ka+  ++vsvGmRf+m fete+ss rr++Gt+++++d+dp rWpnS+Wrs+k
  Kaladp0045s0344.1.p 251 AAHAAATNSCFTIFYNPRACPSEFVIPLSKYVKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITSINDIDPARWPNSHWRSVK 334
                          79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 824 aa     Download sequence    
MKLSASSGTA HDGDNRCLNS QLWHACAGPL VSLPTAGSRV VYFPQGHSEQ VAATTNRDVD  60
GQIPNYPSLP PQLICQLHNV TMHADVETDE VYAQMTLQPL SLQEQEVTYL PMEFGIPSKQ  120
PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFSLQP PAQELIAKDL HDVEWKFRHI  180
FRGQPKRHLL TTGWSVFVSA KRLVAGDAVL FIWNERNQLL LGIRRATRPQ TAMPSSVLSS  240
DSMHIGLLAA AAHAAATNSC FTIFYNPRAC PSEFVIPLSK YVKAVFHTRV SVGMRFRMLF  300
ETEESSVRRY MGTITSINDI DPARWPNSHW RSVKVGWDES TAGERQPRVS LWDIEPLTTF  360
PMYPSLFPFR MKRPWYPGVS SFQDHRDEAA GASLYSDHGR QALNFQQVGM FPCMQSRIDP  420
SLFGHNQDHY QPIMASGLVN TENGGHLKQQ FMHFNMPLQS HQVPDGSNAQ LQQLNKIGQQ  480
ASTQSVMHGQ TILTENLPTH FLQQQHNNQL KEVQQPSKQM YQQETQNQIE QFRQRHQLDM  540
GSSSVPKQEF TNSRTNFERQ ENASSRHNVL DSPGDGSSLM YVDQLSQQFY RPKFLHSEGA  600
SFAHSLSLSP YLEKDAASEP DTRNPVNRSH SSYGVSIDSS GLIMPTNVPI FTGSPIDAKA  660
SSVPPEDSSV FQGSMYGGRQ DSPNLYCVRQ FGSPLTSQIF VKVYKSGSVG RSLDISRFSS  720
YDELREELGQ MFDIEGHLDD PLRSGWQLVF VDRENDVLLL GDDPWEAFVN NVWYIKILSP  780
EDLHKLGNEG VELPNPTDAN LGGHNNDDHD AVSKLPPIGP LGY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein