PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0123.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 261aa MW: 28294.8 Da PI: 8.633 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.9e-18 | 187 | 220 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg+ kTp+WR gpdg+ktLCnaCG++y++ + Kaladp0045s0123.1.p 187 CKHCGSEKTPQWRAGPDGPKTLCNACGVRYKSGR 220 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGFFDTAPSA CFIDDLLNFN IDDNDRDKAN GSKNPKSLSP PNTFFPLPES EEEEELEWLS 60 NKDVFPSVDT FVPSVETFVD VIPVEPSTGV LKHVSPVSVL ENSISSFGSN NSNDSNAVIT 120 TCCIGRGLAP PIRRPRSRGS QKRRRGGFVD ISSQQWFICC SSIHTNKTGN NAAKASGIAS 180 GITGRKCKHC GSEKTPQWRA GPDGPKTLCN ACGVRYKSGR LCPEYRPASS PTFSSAVHSN 240 SHRKILEMKK MKQHNGKPCG * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 1e-42 | GATA family protein |