PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0039.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 26349.6 Da PI: 6.1711 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.5 | 1.3e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n s rqvtfskRr g++KKAeEL vLCda+v +i+fsstgkl eyss Kaladp0045s0039.1.p 9 KKIDNVSARQVTFSKRRRGLFKKAEELAVLCDADVGLIVFSSTGKLSEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 51.7 | 3.8e-18 | 93 | 175 | 18 | 100 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++++kL +e+ + +++R+l GedL+ L+++eL++Le+ Le +l+++ ++K e ++++i++lq k +l een++Lr++++e Kaladp0045s0039.1.p 93 NRNYTKLSQEVAEKSHQLRRLRGEDLQGLDIEELRELEKTLEFGLNRVIETKGEKIMNEINHLQAKGAQLMEENERLRRQVAE 175 57899***************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVREKIQIKK IDNVSARQVT FSKRRRGLFK KAEELAVLCD ADVGLIVFSS TGKLSEYSSS 60 SMKEILERYK MQSKYLEKLQ QPTPSLELQL VENRNYTKLS QEVAEKSHQL RRLRGEDLQG 120 LDIEELRELE KTLEFGLNRV IETKGEKIMN EINHLQAKGA QLMEENERLR RQVAEMSNNG 180 HVKLSGVSFS ETTAYEDGHS ESITNGSNNS NNGPPPESDD SSDTSLRLGL PY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-89 | MIKC_MADS family protein |