PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0044s0030.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 384aa    MW: 42250.2 Da    PI: 7.0967
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0044s0030.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.6e-09208255455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Kaladp0044s0030.1.p 208 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 255
                          8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
METDLLPWTQ NPPATYCSPE MSFSNSTWDH FHSPPPPSAT AAGPAHLNLP MLQHQMPALA  60
ADPGFAERAA RFSCFGSRSF NARSHAQLPT PLDSLKLHRV ASCHFPGSAS PLQGIHIQHT  120
DNTKFPSDSR EESSVSQKVQ SSEPVGRKRK SVPRAKPKLV ESNDPDSKRT KSDENEKGGK  180
SNDNSKQPPE PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK  240
AVMLDEIINY VQSLQQQVEF LSMKLATVNP GMDSVHLEDL LTKEILQARA AIYSVESSNS  300
ASAAFPFGLP NATTDSQFCS NSLNNDDQLR QSGHHQHGMQ LPSFNGFCNS ATQVSMWEDE  360
LHNVVQMGFA AGSTEPPQMK MEP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48560.11e-70bHLH family protein