PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0238.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 350aa    MW: 39935 Da    PI: 6.6283
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0238.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.8e-08205245954
                          HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Kaladp0043s0238.1.p 205 ARHRRERISEKMRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 245
                          699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MDPHTRGHNH KQLISHSIAW GETASPSSLQ NMASSMEDHH SHLFFHDQPH HHLLLPCLDH  60
HHSSAWQQSS SSDHYNNYSI PFSHSHQIVS SPPSASLFFV GSPAAQHHQL TLLDHHHHEH  120
HQHNNNHIPE EEEDQGNNQP RRDLVAARNN EEDDHDDEVD EELSAMKEMM YKIAAMQPVD  180
IDPSTIRKPK RRNVRISDDP QSVAARHRRE RISEKMRILQ RLVPGGTKMD TASMLDEAIR  240
YVKFLKRQIR HLQQDDHPQQ QPPPVLMPAP ESSKSYLNNT CADDHHLTVT VNDNKHQQYV  300
RLFSADSTTA ANNTSTVSLL QNDDRQADDI SLHFLNSSAI MDKLPAYGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-44bHLH family protein