PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0043s0229.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 183aa MW: 20061.6 Da PI: 6.8591 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.8 | 2e-39 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk lrrkC++dC+l+pyfp+++p++fa vhk+FGa+n++k+l+++p + r +a++++++eA r+rdP+yG+vg+i++lqqq+ q+ Kaladp0043s0229.1.p 10 RCAACKCLRRKCPADCILSPYFPSSNPQRFASVHKVFGAANITKMLEQVPMHLRGQAAECMIFEAATRTRDPIYGSVGIISQLQQQITQV 99 6***************************************************************************************** PP DUF260 91 kaelallke 99 ++e+ +++ Kaladp0043s0229.1.p 100 QNEIMKIRG 108 ***998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MSHYHSSSTR CAACKCLRRK CPADCILSPY FPSSNPQRFA SVHKVFGAAN ITKMLEQVPM 60 HLRGQAAECM IFEAATRTRD PIYGSVGIIS QLQQQITQVQ NEIMKIRGEI ALQSAQQQHN 120 QTQTTLRMEQ LSDQSGLDVG PDIGLGLDVD TGPSSGADAG SSSGRHYEMD LDEFYAKFNH 180 QP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 1e-26 | LBD family protein |