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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0043s0126.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 424aa MW: 47692.8 Da PI: 9.7323 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.6 | 5.6e-12 | 74 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n +r k + g ++ +e Aa+a++ a+ k++g Kaladp0043s0126.1.p 74 SKFRGVSRHRWTGRFEAHLWDkGTWNPtQRkKGKQ-GAYDDEESAARAYDLAAIKYWG 130 79*******************77777786635555.99***9**************98 PP | |||||||
2 | AP2 | 50.4 | 5.5e-16 | 173 | 224 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Kaladp0043s0126.1.p 173 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 224 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MDTTTVKSEG SSVGHSTSMI REVDNAIVTK KSTKRRRRDH RVPAIVLPSS SNSEGNLQLL 60 HHVAQSPTAA KRSSKFRGVS RHRWTGRFEA HLWDKGTWNP TQRKKGKQGA YDDEESAARA 120 YDLAAIKYWG PSTFTNFPAS DYEKEIELMK NITKEEYLAT LRRRSSGFSR GVSKYRGVAR 180 HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AAHAYDIAAI EYRGVNAVTN FDLSTYIRWL 240 RPGGPAPTDP QDPILNTMEN KPPQLLFNQF RTQQADMSQL NSLNYKPDDF TSPKRQDFSQ 300 TKFPSSSNSR INPSSPTALG LLLRSSVFRN LVQQNSTASE ECPSHEALNS NTQQSNQMNE 360 DDELGRILFQ EVGTTNPFTF SSAETTLPDM TSPNSHSTPL YNPETQSLWT STLNISPSTH 420 YPS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 108 | PTQRKKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-82 | AP2 family protein |