PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0126.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 424aa    MW: 47692.8 Da    PI: 9.7323
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0126.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.6e-1274130155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s+++GV++++++gr++A+++d  ++n  +r k  + g ++ +e Aa+a++ a+ k++g
  Kaladp0043s0126.1.p  74 SKFRGVSRHRWTGRFEAHLWDkGTWNPtQRkKGKQ-GAYDDEESAARAYDLAAIKYWG 130
                          79*******************77777786635555.99***9**************98 PP

2AP250.45.5e-16173224155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  Kaladp0043s0126.1.p 173 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 224
                          89****99**********99966...3.6*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MDTTTVKSEG SSVGHSTSMI REVDNAIVTK KSTKRRRRDH RVPAIVLPSS SNSEGNLQLL  60
HHVAQSPTAA KRSSKFRGVS RHRWTGRFEA HLWDKGTWNP TQRKKGKQGA YDDEESAARA  120
YDLAAIKYWG PSTFTNFPAS DYEKEIELMK NITKEEYLAT LRRRSSGFSR GVSKYRGVAR  180
HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AAHAYDIAAI EYRGVNAVTN FDLSTYIRWL  240
RPGGPAPTDP QDPILNTMEN KPPQLLFNQF RTQQADMSQL NSLNYKPDDF TSPKRQDFSQ  300
TKFPSSSNSR INPSSPTALG LLLRSSVFRN LVQQNSTASE ECPSHEALNS NTQQSNQMNE  360
DDELGRILFQ EVGTTNPFTF SSAETTLPDM TSPNSHSTPL YNPETQSLWT STLNISPSTH  420
YPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100108PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-82AP2 family protein