PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0376.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 494aa MW: 53775.7 Da PI: 7.5888

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0376.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.4	1.1e-22	155	198	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e Kaladp0042s0376.1.p 155 DQEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKNRPRSRKHVE 198 68****************************************97 PP
2	QLQ	47.7	4.8e-17	96	129	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT aQ+q+L++Q +yK L+a+ PvPp+Ll++i Kaladp0042s0376.1.p 96 SFTKAQWQELERQTVVYKFLSASIPVPPQLLMPI 129 6********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MGSDKQAAEC DVGLGLRIQQ MTPSMPLRQQ QQQLTSPGFG AGGGGLFDGS AFFRQGGNHA 60 ADDAYNIVGA ETRNTMNYFN SDLPFQSQVP TRGPFSFTKA QWQELERQTV VYKFLSASIP 120 VPPQLLMPIN GTQINLAVSH PNRLLNFGLP SNGTDQEPWR CRRTDGKKWR CSRDVAPDQK 180 YCERHAHKNR PRSRKHVELH TPNLTSAPST STGNKKNHQL DLKVSSKSVE PRSHIFNQNG 240 PQLSSYPTLA SYDQPRCSFD WFGKGNTTSG DRGSQLWTPI MQPEEGLAGS QSNNFFKHVS 300 TCKRQKETPM SSNGLGMNLG AQGHNQNDPC GLLLGPKLAF LNDDLNLEQT EMPRGFIDAW 360 STADGGDSVC KVSHKFSDPS NKTHPISSLT LSMSGGNDAN AEERHEHLGI GLMDAEQDSS 420 GLKLQQPMVN WMSTEPWMGS TPGGPLAEAL CLGISSNLKS VNAHQPSSPY GCSSNTANTK 480 QQSSSDESSS HGL*

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MGSDKQAAEC DVGLGLRIQQ MTPSMPLRQQ QQQLTSPGFG AGGGGLFDGS AFFRQGGNHA  60
ADDAYNIVGA ETRNTMNYFN SDLPFQSQVP TRGPFSFTKA QWQELERQTV VYKFLSASIP  120
VPPQLLMPIN GTQINLAVSH PNRLLNFGLP SNGTDQEPWR CRRTDGKKWR CSRDVAPDQK  180
YCERHAHKNR PRSRKHVELH TPNLTSAPST STGNKKNHQL DLKVSSKSVE PRSHIFNQNG  240
PQLSSYPTLA SYDQPRCSFD WFGKGNTTSG DRGSQLWTPI MQPEEGLAGS QSNNFFKHVS  300
TCKRQKETPM SSNGLGMNLG AQGHNQNDPC GLLLGPKLAF LNDDLNLEQT EMPRGFIDAW  360
STADGGDSVC KVSHKFSDPS NKTHPISSLT LSMSGGNDAN AEERHEHLGI GLMDAEQDSS  420
GLKLQQPMVN WMSTEPWMGS TPGGPLAEAL CLGISSNLKS VNAHQPSSPY GCSSNTANTK  480
QQSSSDESSS HGL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	2e-34	GRF family protein