PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0359.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 581aa MW: 65010 Da PI: 6.4471

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0359.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.5	1.4e-24	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kvlt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv+a++L +gD++vF Kaladp0042s0359.3.p 128 FCKVLTASDTSTHGGFSVYRKHATEClppldMSQPTPTQELIGKDLHGMEWRFKHIFRGQPRRHLLTTGWSTFVSAKRLVTGDSFVFL-- 215 99**************************9777777889********************************************.. PP SSSEE..EEEEE- CS B3 86 grsefelvvkvfr 98 + +++el+v+v+r Kaladp0042s0359.3.p 216 RGEDGELRVGVRR 228 4499*****98 PP
2	Auxin_resp	90.1	3.9e-30	253	331	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 a+ha++ +++F+v+Y+Pr+ s+Fvv+v+k+++a k+ + vG Rfkm+fe++d +er +sGt+vgv ++++ +W +SkWrsL Kaladp0042s0359.3.p 253 ASHAVTAQTIFQVFYKPRK--SQFVVSVNKYLEANKSGFGVGKRFKMRFEGDDLPERWFSGTIVGVDNISQ-QWADSKWRSL 331 689*************6..9******************************************666.*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MMMMMPNRCT NLSGEGMGGD GGLYEELWKA CAGPLVDVPR ERERVYYFPQ GHLEQLDTST 60 NQEMDQRITM FKLPSKILCK VLNVYLMAEP ETDEVYAQIT LIPEPDQTEP TKPDPCLPEP 120 RRPTVHSFCK VLTASDTSTH GGFSVYRKHA TECLPPLDMS QPTPTQELIG KDLHGMEWRF 180 KHIFRGQPRR HLLTTGWSTF VSAKRLVTGD SFVFLRGEDG ELRVGVRRLA CQQSNMPSVI 240 SSHSIQLGVL ASASHAVTAQ TIFQVFYKPR KSQFVVSVNK YLEANKSGFG VGKRFKMRFE 300 GDDLPERWFS GTIVGVDNIS QQWADSKWRS LRVQWDEPAA ISRPDTVSPW EIENLTPSVP 360 SCISPAIPSK NKRLRPPGDM QVPGEARKKV DAPISCRLFG IELLNPSTST PTEKPVMQPV 420 CASVGSAEGN IPDTPSAAES EQNSELSKTF KFKQLEQANG KQSFSTSARS RTKVQMQGVP 480 VGRAVDLTTL EGYDHLIDEL EDMFEIKGEL RPRNKWEIVF TDDEGDMMLV GDDPWTEFCS 540 MVRRIFICSS QEMKKLRSGS KHSVPSIELG ETATILSSDY *

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MMMMMPNRCT NLSGEGMGGD GGLYEELWKA CAGPLVDVPR ERERVYYFPQ GHLEQLDTST  60
NQEMDQRITM FKLPSKILCK VLNVYLMAEP ETDEVYAQIT LIPEPDQTEP TKPDPCLPEP  120
RRPTVHSFCK VLTASDTSTH GGFSVYRKHA TECLPPLDMS QPTPTQELIG KDLHGMEWRF  180
KHIFRGQPRR HLLTTGWSTF VSAKRLVTGD SFVFLRGEDG ELRVGVRRLA CQQSNMPSVI  240
SSHSIQLGVL ASASHAVTAQ TIFQVFYKPR KSQFVVSVNK YLEANKSGFG VGKRFKMRFE  300
GDDLPERWFS GTIVGVDNIS QQWADSKWRS LRVQWDEPAA ISRPDTVSPW EIENLTPSVP  360
SCISPAIPSK NKRLRPPGDM QVPGEARKKV DAPISCRLFG IELLNPSTST PTEKPVMQPV  420
CASVGSAEGN IPDTPSAAES EQNSELSKTF KFKQLEQANG KQSFSTSARS RTKVQMQGVP  480
VGRAVDLTTL EGYDHLIDEL EDMFEIKGEL RPRNKWEIVF TDDEGDMMLV GDDPWTEFCS  540
MVRRIFICSS QEMKKLRSGS KHSVPSIELG ETATILSSDY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	0.0	ARF family protein