PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0042s0359.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 676aa MW: 75353.3 Da PI: 6.6588 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 77.2 | 1.8e-24 | 128 | 228 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kvlt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv+a++L +gD++vF Kaladp0042s0359.1.p 128 FCKVLTASDTSTHGGFSVYRKHATEClppldMSQPTPTQELIGKDLHGMEWRFKHIFRGQPRRHLLTTGWSTFVSAKRLVTGDSFVFL-- 215 99****************************9777777889************************************************.. PP SSSEE..EEEEE- CS B3 86 grsefelvvkvfr 98 + +++el+v+v+r Kaladp0042s0359.1.p 216 RGEDGELRVGVRR 228 4499*******98 PP | |||||||
2 | Auxin_resp | 89.8 | 4.8e-30 | 253 | 331 | 1 | 82 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 a+ha++ +++F+v+Y+Pr+ s+Fvv+v+k+++a k+ + vG Rfkm+fe++d +er +sGt+vgv ++++ +W +SkWrsL Kaladp0042s0359.1.p 253 ASHAVTAQTIFQVFYKPRK--SQFVVSVNKYLEANKSGFGVGKRFKMRFEGDDLPERWFSGTIVGVDNISQ-QWADSKWRSL 331 689***************6..9**********************************************666.*********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 676 aa Download sequence |
MMMMMPNRCT NLSGEGMGGD GGLYEELWKA CAGPLVDVPR ERERVYYFPQ GHLEQLDTST 60 NQEMDQRITM FKLPSKILCK VLNVYLMAEP ETDEVYAQIT LIPEPDQTEP TKPDPCLPEP 120 RRPTVHSFCK VLTASDTSTH GGFSVYRKHA TECLPPLDMS QPTPTQELIG KDLHGMEWRF 180 KHIFRGQPRR HLLTTGWSTF VSAKRLVTGD SFVFLRGEDG ELRVGVRRLA CQQSNMPSVI 240 SSHSIQLGVL ASASHAVTAQ TIFQVFYKPR KSQFVVSVNK YLEANKSGFG VGKRFKMRFE 300 GDDLPERWFS GTIVGVDNIS QQWADSKWRS LRVQWDEPAA ISRPDTVSPW EIENLTPSVP 360 SCISPAIPSK NKRLRPPGDM QVPETPTASG LWHHKPEDKN VAHFSSNNGS CTSRAYTDGG 420 WLSAQGHHSK LKSEHIISNG SSSNHHTEDS LHAVAWPAVM AQPHVHMLKL NSDPLFDSGE 480 ARKKVDAPIS CRLFGIELLN PSTSTPTEKP VMQPVCASVG SAEGNIPDTP SAAESEQNSE 540 LSKTFKFKQL EQANGKQSFS TSARSRTKVQ MQGVPVGRAV DLTTLEGYDH LIDELEDMFE 600 IKGELRPRNK WEIVFTDDEG DMMLVGDDPW TEFCSMVRRI FICSSQEMKK LRSGSKHSVP 660 SIELGETATI LSSDY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23980.1 | 0.0 | ARF family protein |