PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0561.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 307aa MW: 33869.5 Da PI: 7.5019 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.4 | 3.9e-06 | 185 | 229 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ r+RR++i ++ +eL +l+P +++ ae+ + A Y+k Lq Kaladp0040s0561.1.p 185 SIAARQRRRKIADKTQELGKLIPGgH------RMNTAEMFQSASMYVKFLQ 229 6788*******************954......9***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGLSCYMSNR SAADYMLQQE QLLLELGCFQ DDFTLAHTSI DALFHPPQQK HPSFIPQPPQ 60 LPTTHFENFS SQLLPCVQQK SCHPKRQKIA PWPHPNQQSD THFNYDSMLA CGTAPFVDGC 120 WSSAADDAQL LLPLAQEFQG GDQSWLQDDF PAEAFLCGAT ADRPGSGNNS SRPGRGGGGG 180 LSAQSIAARQ RRRKIADKTQ ELGKLIPGGH RMNTAEMFQS ASMYVKFLQA QIAMLTLTDS 240 LQVTLNSNLI QVLVASPVVQ EKLYTQEKCL VPRRLVQSLP RDSKLQSLHP SLIKQINNLL 300 QTPRAE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 4e-25 | bHLH family protein |