PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0465.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 332aa MW: 36812.7 Da PI: 9.9726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0465.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50	5.5e-16	157	203	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ +L++l+P+a K +Ka++L ++++Y+k+Lq Kaladp0040s0465.2.p 157 VHNQSERKRRDRINQKMKTLQKLVPNA-----SKTDKASMLDEVIKYLKQLQ 203 5***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEPFYRLNDY DQVAELTWEN GQLGFQGLAP ATHGAKPTWG TANETLESIV QQGSTVFHHQ 60 QPQQHSNLNH IHYPAANTNP CSSFAASSTW LESDHRHARV ESLKRSSLKE SNTVIMTRAT 120 EEDLVYHYGS DNKNEGHDSK GGAGRSSSTR RSRTAAVHNQ SERKRRDRIN QKMKTLQKLV 180 PNASKTDKAS MLDEVIKYLK QLQGQIQMMN YVRNMPPMMV PLAMQQQQQN QMSLLARTGM 240 NLNMGLMGMG GMLNMMHMPR SVPLQSAPHP SATPSTNATF PPSFLMVPPM IPTPPISQSM 300 NTDLFNKMAA FCAQQANSSA TAIKEKTSPT S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	106	ESLKRS
2	162	167	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-33	bHLH family protein