PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0465.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 344aa MW: 38120.3 Da PI: 9.818

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0465.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.8e-16	169	215	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ +L++l+P+a K +Ka++L ++++Y+k+Lq Kaladp0040s0465.1.p 169 VHNQSERKRRDRINQKMKTLQKLVPNA-----SKTDKASMLDEVIKYLKQLQ 215 5***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MYHCRVCFGY EVLGCGRRLN DYDQVAELTW ENGQLGFQGL APATHGAKPT WGTANETLES 60 IVQQGSTVFH HQQPQQHSNL NHIHYPAANT NPCSSFAASS TWLESDHRHA RVESLKRSSL 120 KESNTVIMTR ATEEDLVYHY GSDNKNEGHD SKGGAGRSSS TRRSRTAAVH NQSERKRRDR 180 INQKMKTLQK LVPNASKTDK ASMLDEVIKY LKQLQGQIQM MNYVRNMPPM MVPLAMQQQQ 240 QNQMSLLART GMNLNMGLMG MGGMLNMMHM PRSVPLQSAP HPSATPSTNA TFPPSFLMVP 300 PMIPTPPISQ SMNTDLFNKM AAFCAQQANS SATAIKEKTS PTS*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MYHCRVCFGY EVLGCGRRLN DYDQVAELTW ENGQLGFQGL APATHGAKPT WGTANETLES  60
IVQQGSTVFH HQQPQQHSNL NHIHYPAANT NPCSSFAASS TWLESDHRHA RVESLKRSSL  120
KESNTVIMTR ATEEDLVYHY GSDNKNEGHD SKGGAGRSSS TRRSRTAAVH NQSERKRRDR  180
INQKMKTLQK LVPNASKTDK ASMLDEVIKY LKQLQGQIQM MNYVRNMPPM MVPLAMQQQQ  240
QNQMSLLART GMNLNMGLMG MGGMLNMMHM PRSVPLQSAP HPSATPSTNA TFPPSFLMVP  300
PMIPTPPISQ SMNTDLFNKM AAFCAQQANS SATAIKEKTS PTS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	118	ESLKRS
2	174	179	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	7e-33	bHLH family protein