PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0040s0245.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 27143.2 Da PI: 8.7141 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.1 | 1e-05 | 140 | 185 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ah + r R +++ +++++L++l+ + +K + a++L +A+ YIk L Kaladp0040s0245.1.p 140 AHAAKPRPRKEKLGERIATLQQLVSPF-----GKTDTASVLHEAMSYIKFL 185 68888899999**************98.....8****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MADDDRPEPR SFYQLLFSDP IVTLNTSKAA ADVTGPDYSE SFYGPNPPKM LCFGAYQKEE 60 EAICSEITAA ALRQMVSQSD SSSTSSGNRH NSSSGKSSTA EPKPNPNRKR TGSGRNPVGG 120 GASAEGKKTR SEKPAAAAPA HAAKPRPRKE KLGERIATLQ QLVSPFGKTD TASVLHEAMS 180 YIKFLHDQVQ VLSSPYLHSS PNQGGGDGGA VGLRSRGLCL VPVSCTAQVD GSTNGADFWA 240 PAAGINISSC VNLASSTKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19500.1 | 7e-38 | bHLH family protein |