PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0190.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25634.4 Da PI: 10.2583 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.2 | 5.3e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g+lKKA+ELS+LCdaev +iifsstg+lye+ss Kaladp0040s0190.1.p 10 RIDNSTSRQVTFSKRRKGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 83 | 6.6e-28 | 82 | 170 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +q+e+a ++++enLq ++R+l+Ge ++ + + eLq Le+qLe slk +R kK+ell++qi+el++k + ++en +L +k Kaladp0040s0190.1.p 82 PTTEMKFWQTEAAMFRQQLENLQDKHRQLMGEAINGMGIHELQALENQLEMSLKGVRMKKHELLTDQIRELREKGSRKHQENLELCRKA 170 567899*****************************************************************************999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRKGLLK KAKELSILCD AEVGLIIFSS TGRLYEFSST 60 SMKSVIERYN RSKGEGFQLL NPTTEMKFWQ TEAAMFRQQL ENLQDKHRQL MGEAINGMGI 120 HELQALENQL EMSLKGVRMK KHELLTDQIR ELREKGSRKH QENLELCRKA NQVITRDEST 180 EPPARARVDG TTREAPGADT LLAPLTLRPS SAEEVRSYHT YISL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 4e-87 | MIKC_MADS family protein |