PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0084.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28130.1 Da PI: 5.3563 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.2 | 2.9e-13 | 208 | 253 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l+P+ +k + a++L +AveY+k+Lq Kaladp0040s0084.3.p 208 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLDEAVEYVKYLQ 253 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MQPTPGGSSS SSGDGGLSRG RLARFRSAPA SWLEALLEDD DEGEGVDDSL DALKPTETLT 60 QLLSSSNPIT SSPAVSSLRN SCGVDVAGAD PGLFEPSNAA FLRQNSSPAD LFAGGYDGPF 120 SNYSMSSAGY DYLSTPPPTA AKRLRDHPNS QHQHYSATFS AQLKGEQSSG HLQGGVSSYL 180 DLDMDKLLED SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQDLVP NMDKQTNTAD 240 MLDEAVEYVK YLQKQIQYLV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 3e-59 | bHLH family protein |