PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0084.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 276aa MW: 29903 Da PI: 6.0949 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.1 | 3.2e-13 | 208 | 253 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l+P+ +k + a++L +AveY+k+Lq Kaladp0040s0084.1.p 208 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLDEAVEYVKYLQ 253 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MQPTPGGSSS SSGDGGLSRG RLARFRSAPA SWLEALLEDD DEGEGVDDSL DALKPTETLT 60 QLLSSSNPIT SSPAVSSLRN SCGVDVAGAD PGLFEPSNAA FLRQNSSPAD LFAGGYDGPF 120 SNYSMSSAGY DYLSTPPPTA AKRLRDHPNS QHQHYSATFS AQLKGEQSSG HLQGGVSSYL 180 DLDMDKLLED SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQDLVP NMDKQTNTAD 240 MLDEAVEYVK YLQKQIQELT EHQKNCKCSS KEQHH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 8e-68 | bHLH family protein |