PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0065.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23599.5 Da PI: 9.3079 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.3 | 3.7e-05 | 39 | 79 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L++++P + +k Ka +L + ++Y++ Lq Kaladp0040s0065.1.p 39 VRREKIGQRMRILQDVVPGC----NKITGKAGMLDEIINYVQVLQ 79 6*******************....999**************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGARNHDRRQ ANFQSDFNTR HLQRQRRLFQ AANCFCVQVR REKIGQRMRI LQDVVPGCNK 60 ITGKAGMLDE IINYVQVLQR QVEFLSMKLA TVTIAHDFNN IINIPSAVHT GVAVTDAISH 120 AHLFFNQSYA SNITETGQNS FDTARGSTMS TPTSVHKYFL DAAGFTPPLT WNPDFQAVPG 180 QTFHQSRSGT FSSHPPEADT TSMSNQFTMF * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.1 | 3e-29 | bHLH family protein |