PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0039s0587.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 129aa MW: 13662.8 Da PI: 10.3008 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 65.7 | 1.1e-20 | 67 | 114 | 1 | 48 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48 +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++k+l+ Kaladp0039s0587.1.p 67 PCAACKILRRRCADKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQV 114 7********************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 129 aa Download sequence |
MESIISNGKT TPPALTITPT TFNSFSSSFS SSPSSSSSPP SSHSSPTTAL PPASPLPPQP 60 QVIVMSPCAA CKILRRRCAD KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQVPLKSTS 120 HFLSFWAL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28500.1 | 6e-32 | LBD family protein |