PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0575.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 641aa    MW: 70180.2 Da    PI: 6.8508
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0575.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.19.4e-25106207199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f k+lt+sd+++ g +++p+ +ae++         ++ +  t+  +d +g++W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF 
  Kaladp0039s0575.2.p 106 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TILAKDVHGQTWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL 193
                          89****************************997556555..89*********************************************** PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                            +++++el+v+v+r+
  Kaladp0039s0575.2.p 194 --RDENGELCVGVRRA 207
                          ..569999******97 PP
2Auxin_resp111.86.7e-37259342183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                          a++ a+++++F++vY+Pra+t+eF+v+++ v++a++v+++ GmRfkm fetedss++++ +Gt+++ + +dpvrWpnS+Wr+L+
  Kaladp0039s0575.2.p 259 AVSLAASGKPFQIVYYPRAGTPEFCVRASVVSEAMRVQWCCGMRFKMPFETEDSSRISWfMGTISAAQVADPVRWPNSPWRLLQ 342
                          678899****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MDKCLDPQLW HACAGGMVQM PPVGTNVFYF PQGHSEHASS DVDFRAFAKL PSMFLCRVSA  60
VKYMADPDSD EVFAKIRLLP TNVFDLAADD AAFSGAVDDQ DPPASFAKTL TQSDANNGGG  120
FSVPRYCAET IFPRLDYTAD PPVQTILAKD VHGQTWKFRH IYRGTPRRHL LTTGWSNFVN  180
HKKLVAGDSI VFLRDENGEL CVGVRRATRG IGGCDPQVCW NPAGGNFEST YGGGDDRKRM  240
QVGDGRMRGR VKAESVLEAV SLAASGKPFQ IVYYPRAGTP EFCVRASVVS EAMRVQWCCG  300
MRFKMPFETE DSSRISWFMG TISAAQVADP VRWPNSPWRL LQVAWDEPDL LQNVKRVSPW  360
LVEVVSNMPS VHLTPFSPPR KKVRLPQHPD FPLLGQFPVL QHSEFPSVGH FPLPPLAKNL  420
LGTNSPFPAG IQGARHGQFG LSSSDLHFNK LQSGLFPVKF QQLSKAPGPD SRMSSSDFPS  480
NKCQENDGRC CSLTMGRNVP EKISNVVKAP MFVLFGQPIL TEEQISQSSS DDTIGNSSSE  540
GNQEKVANVV SDASRFGSNQ NGQMENSSDD GSPWLKDHSM TELKLQTGHC NDASPPLGFS  600
ILSSYGDLHT KLTHMFSNGE GLEVLRTQLA TNPLGTDSSS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein