PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0039s0575.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ARF | ||||||||
Protein Properties | Length: 641aa MW: 70180.2 Da PI: 6.8508 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 78.1 | 9.4e-25 | 106 | 207 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF Kaladp0039s0575.1.p 106 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TILAKDVHGQTWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL 193 89****************************997556555..89*********************************************** PP E-SSSEE..EEEEE-S CS B3 84 ldgrsefelvvkvfrk 99 +++++el+v+v+r+ Kaladp0039s0575.1.p 194 --RDENGELCVGVRRA 207 ..569999******97 PP | |||||||
2 | Auxin_resp | 111.8 | 6.7e-37 | 259 | 342 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+++++F++vY+Pra+t+eF+v+++ v++a++v+++ GmRfkm fetedss++++ +Gt+++ + +dpvrWpnS+Wr+L+ Kaladp0039s0575.1.p 259 AVSLAASGKPFQIVYYPRAGTPEFCVRASVVSEAMRVQWCCGMRFKMPFETEDSSRISWfMGTISAAQVADPVRWPNSPWRLLQ 342 678899****************************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 641 aa Download sequence |
MDKCLDPQLW HACAGGMVQM PPVGTNVFYF PQGHSEHASS DVDFRAFAKL PSMFLCRVSA 60 VKYMADPDSD EVFAKIRLLP TNVFDLAADD AAFSGAVDDQ DPPASFAKTL TQSDANNGGG 120 FSVPRYCAET IFPRLDYTAD PPVQTILAKD VHGQTWKFRH IYRGTPRRHL LTTGWSNFVN 180 HKKLVAGDSI VFLRDENGEL CVGVRRATRG IGGCDPQVCW NPAGGNFEST YGGGDDRKRM 240 QVGDGRMRGR VKAESVLEAV SLAASGKPFQ IVYYPRAGTP EFCVRASVVS EAMRVQWCCG 300 MRFKMPFETE DSSRISWFMG TISAAQVADP VRWPNSPWRL LQVAWDEPDL LQNVKRVSPW 360 LVEVVSNMPS VHLTPFSPPR KKVRLPQHPD FPLLGQFPVL QHSEFPSVGH FPLPPLAKNL 420 LGTNSPFPAG IQGARHGQFG LSSSDLHFNK LQSGLFPVKF QQLSKAPGPD SRMSSSDFPS 480 NKCQENDGRC CSLTMGRNVP EKISNVVKAP MFVLFGQPIL TEEQISQSSS DDTIGNSSSE 540 GNQEKVANVV SDASRFGSNQ NGQMENSSDD GSPWLKDHSM TELKLQTGHC NDASPPLGFS 600 ILSSYGDLHT KLTHMFSNGE GLEVLRTQLA TNPLGTDSSS * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G30080.1 | 0.0 | ARF family protein |