PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0547.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 336aa    MW: 38945.5 Da    PI: 6.0609
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0547.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.95.8e-32231142102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl k ye++ede++k ++sw++  nsfv+ de++f+ ++Lpky+kh+nf+SF+RQLn+YgF+kv+ ++         weF+++ F +g++
  Kaladp0039s0547.1.p  23 FLIKCYEMVEDEANKAVVSWTDIHNSFVINDETDFTLRLLPKYWKHNNFSSFMRQLNIYGFRKVDADR---------WEFANDGFMRGQR 103
                          9****************************************************************999.........************* PP

                          XXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkks 102
                          +ll++i r+k+
  Kaladp0039s0547.1.p 104 HLLKTISRRKN 114
                          *********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MVKSGAAGDG NCDDVGSPPI APFLIKCYEM VEDEANKAVV SWTDIHNSFV INDETDFTLR  60
LLPKYWKHNN FSSFMRQLNI YGFRKVDADR WEFANDGFMR GQRHLLKTIS RRKNIQGTDH  120
RKSVKQIEKA NKACDRVEYF DLWNEVHNLQ IDKKALMQEL VDLRQHQEML DNKLLLLRDR  180
LKGMEKNQQQ MLSFLVMAMR NPGYFVKLLQ PREHNWPNSE KVKNANMLER VMEVSEAAVT  240
SDVMLATDGT VVRYRPPTYQ EGTCPPSLPS KCFSRPKFEI AEGMQEFFMD SELMKTLMDE  300
NQPMLDYQST FVLPDLHDDG LLDHFVFSSP LIDNC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.16e-72HSF family protein