PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0533.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 272aa MW: 30402.6 Da PI: 8.557 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl Kaladp0039s0533.1.p 13 KGAWSKQEDQKLIDYIRKYGEGCWRTLPKDAGLLRCGKSCRLRWINYL 60 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.8e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Kaladp0039s0533.1.p 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MRKPCCDKQG TNKGAWSKQE DQKLIDYIRK YGEGCWRTLP KDAGLLRCGK SCRLRWINYL 60 RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLINQGI 120 DPNNHKIIRH TSLHHQYPSQ NYQVPAATTL SHLHRSSNHK PQKGEEPNYK PAATNCNMII 180 NTVDDDAGQA IISEEAASSV EEAAPCSSCP LLPDLNLDLM ICTPSHLLGQ KSKPNDNEVA 240 ATKDHHQRQV VEAAAAGGLQ ALVHMIKIGL C* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 8e-77 | MYB family protein |