PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0491.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 228aa    MW: 25477.7 Da    PI: 7.8994
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0491.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67e-11110157455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++iN+++  L +++P +    +k +  a +L  +++YI+sLq
  Kaladp0039s0491.1.p 110 SHSLAERVRRKKINEKLKSLHDIVPGC----HKTMGMAVMLDVVIKYIQSLQ 157
                          8*************************9....788*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEFIDNDFTI PNGITQYSNN SQPHFHLHHH QHQQVDHFSM SYIQTPLPHP TSHQFHQSLG  60
MPTPEICHKK FDKGGGRKRK RGGNNEGSAE GLKPSDVIHV RAKRGQATDS HSLAERVRRK  120
KINEKLKSLH DIVPGCHKTM GMAVMLDVVI KYIQSLQNQI EFLSMKLLAA SLFHDLNSTD  180
MDAVETMQGP PQGAVVQEME RIAAEGYGGD PYFSSASFPP QGFQNNQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17682GRKRKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.14e-52bHLH family protein