PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0250.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 22376.3 Da PI: 9.9031 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 7.9e-21 | 11 | 60 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g Kaladp0039s0250.1.p 11 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 60 69*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MAEDKEAREV HFRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA YDAAAREFRG 60 TKAKTNFPSP HEPKFVTIPT VAQFKLDRSP SQSSTVESSS PPLDLQLGLL VSPVSLGFQP 120 LSPPYTHTHH HQSKANNFFL DAALGSKNSS NPLLIRPKAS YIQAKPFHFE APASDSDSSS 180 AVIDVTLKRA ILGIDLNLLP TEI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 6e-26 | ERF family protein |